[dcmf] Re: BGP patch for MPICH2

Pavan Balaji balaji at mcs.anl.gov
Mon Feb 25 14:40:58 CST 2008 

Joe,

This is a huge patch. Will you be able to create separate patches for 
different components, so that we can integrate them independently? Here 
are some patches you can create:

1. ROMIO changes

2. MPICH2 test suite changes

3. Rest of the changes

FYI, the confdb/confdb directory is still present in your version and is 
showing up in your patch. This was a bug that has been corrected and can 
be removed. Also, mpich2-1.0.7rc1/test/util/timer/.cvsignore should not 
exist.

Thanks.

  -- Pavan

On 02/25/2008 02:15 PM, Joseph Ratterman wrote:
> 
> Hello everyone,
> 
> These the differences between our version of MPICH2 in git (which will 
> be on the DCMF wiki soon), and the 1.0.7rc1 from subversion.  Both 
> source bases have undergone a fair bit of post-processing to ensure that 
> they are comparable.  Looking at the diff, I think that they have helped 
> eliminate incorrect changes (such as $Id$).
> 
> This does change the existing files from ANL, so it will have to be 
> checked to ensure that you really want the changes.  The end of this 
> email lists all the changed files and added directories that are in the 
> patch.
> 
> 
> SHA1 hash:
> cbacbf97402932c7d8566c04985a0b73eed75292  bgp-mpich-1.0.7rc1.patch
> 
> 
> Enjoy,
> Joe Ratterman
> 
> 
> 
> $ diff -rq mpich2-1.0.7rc1/ bgp-mpich2/  | sort
> Files mpich2-1.0.7rc1/configure.in and bgp-mpich2/configure.in differ
> Files mpich2-1.0.7rc1/maint/simplemake.in and 
> bgp-mpich2/maint/simplemake.in differ
> Files mpich2-1.0.7rc1/src/binding/f77/buildiface and 
> bgp-mpich2/src/binding/f77/buildiface differ
> Files mpich2-1.0.7rc1/src/include/mpiimpl.h and 
> bgp-mpich2/src/include/mpiimpl.h differ
> Files mpich2-1.0.7rc1/src/include/mpiimplthread.h and 
> bgp-mpich2/src/include/mpiimplthread.h differ
> Files mpich2-1.0.7rc1/src/mpi/comm/commutil.c and 
> bgp-mpich2/src/mpi/comm/commutil.c differ
> Files mpich2-1.0.7rc1/src/mpi/datatype/get_elements.c and 
> bgp-mpich2/src/mpi/datatype/get_elements.c differ
> Files 
> mpich2-1.0.7rc1/src/mpid/common/datatype/mpid_type_create_pairtype.c and 
> bgp-mpich2/src/mpid/common/datatype/mpid_type_create_pairtype.c differ
> Files mpich2-1.0.7rc1/src/mpid/Makefile.sm and 
> bgp-mpich2/src/mpid/Makefile.sm differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/ad_testfs/ad_testfs_hints.c and 
> bgp-mpich2/src/mpi/romio/adio/ad_testfs/ad_testfs_hints.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/ad_ufs/ad_ufs.c and 
> bgp-mpich2/src/mpi/romio/adio/ad_ufs/ad_ufs.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/ad_close.c and 
> bgp-mpich2/src/mpi/romio/adio/common/ad_close.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/ad_fstype.c and 
> bgp-mpich2/src/mpi/romio/adio/common/ad_fstype.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/ad_get_sh_fp.c and 
> bgp-mpich2/src/mpi/romio/adio/common/ad_get_sh_fp.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/ad_open.c and 
> bgp-mpich2/src/mpi/romio/adio/common/ad_open.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/ad_read_coll.c and 
> bgp-mpich2/src/mpi/romio/adio/common/ad_read_coll.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/ad_set_sh_fp.c and 
> bgp-mpich2/src/mpi/romio/adio/common/ad_set_sh_fp.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/cb_config_list.c and 
> bgp-mpich2/src/mpi/romio/adio/common/cb_config_list.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/flatten.c and 
> bgp-mpich2/src/mpi/romio/adio/common/flatten.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/lock.c and 
> bgp-mpich2/src/mpi/romio/adio/common/lock.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/common/Makefile.in and 
> bgp-mpich2/src/mpi/romio/adio/common/Makefile.in differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/include/adio.h and 
> bgp-mpich2/src/mpi/romio/adio/include/adio.h differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/include/adioi_errmsg.h and 
> bgp-mpich2/src/mpi/romio/adio/include/adioi_errmsg.h differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/include/adioi_fs_proto.h and 
> bgp-mpich2/src/mpi/romio/adio/include/adioi_fs_proto.h differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/include/adioi.h and 
> bgp-mpich2/src/mpi/romio/adio/include/adioi.h differ
> Files mpich2-1.0.7rc1/src/mpi/romio/adio/include/mpio_error.h and 
> bgp-mpich2/src/mpi/romio/adio/include/mpio_error.h differ
> Files mpich2-1.0.7rc1/src/mpi/romio/configure.in and 
> bgp-mpich2/src/mpi/romio/configure.in differ
> Files mpich2-1.0.7rc1/src/mpi/romio/Makefile.in and 
> bgp-mpich2/src/mpi/romio/Makefile.in differ
> Files mpich2-1.0.7rc1/src/mpi/romio/mpi2-other/info/fortran/Makefile.in 
> and bgp-mpich2/src/mpi/romio/mpi2-other/info/fortran/Makefile.in differ
> Files mpich2-1.0.7rc1/src/mpi/romio/mpi-io/get_amode.c and 
> bgp-mpich2/src/mpi/romio/mpi-io/get_amode.c differ
> Files mpich2-1.0.7rc1/src/mpi/romio/test/file_info.c and 
> bgp-mpich2/src/mpi/romio/test/file_info.c differ
> Files mpich2-1.0.7rc1/src/mpi/timer/mpidtime.c and 
> bgp-mpich2/src/mpi/timer/mpidtime.c differ
> Files mpich2-1.0.7rc1/test/Makefile.sm and bgp-mpich2/test/Makefile.sm 
> differ
> Files mpich2-1.0.7rc1/test/mpi/cxx/io/ioharness.tlt and 
> bgp-mpich2/test/mpi/cxx/io/ioharness.tlt differ
> Files mpich2-1.0.7rc1/test/mpi/errors/coll/rerr.c and 
> bgp-mpich2/test/mpi/errors/coll/rerr.c differ
> Files mpich2-1.0.7rc1/test/mpi/f77/io/ioharness.tlt and 
> bgp-mpich2/test/mpi/f77/io/ioharness.tlt differ
> Files mpich2-1.0.7rc1/test/mpi/f77/io/shpositionf.f and 
> bgp-mpich2/test/mpi/f77/io/shpositionf.f differ
> Files mpich2-1.0.7rc1/test/mpi/init/testlist and 
> bgp-mpich2/test/mpi/init/testlist differ
> Files mpich2-1.0.7rc1/test/mpi/Makefile.sm and 
> bgp-mpich2/test/mpi/Makefile.sm differ
> Files mpich2-1.0.7rc1/test/mpi/pt2pt/testlist and 
> bgp-mpich2/test/mpi/pt2pt/testlist differ
> Files mpich2-1.0.7rc1/test/mpi/runtests.in and 
> bgp-mpich2/test/mpi/runtests.in differ
> Files mpich2-1.0.7rc1/test/TestResults.xsl and 
> bgp-mpich2/test/TestResults.xsl differ
> Files mpich2-1.0.7rc1/test/util/Makefile.sm and 
> bgp-mpich2/test/util/Makefile.sm differ
> Files mpich2-1.0.7rc1/test/util/timer/.cvsignore and 
> bgp-mpich2/test/util/timer/.cvsignore differ
> Only in bgp-mpich2/confdb: confdb
> Only in bgp-mpich2/src/env: genmpxl.pl
> Only in bgp-mpich2/src/env: mpixl.conf.in
> Only in bgp-mpich2/src: mpe
> Only in bgp-mpich2/src/mpid/common/datatype: gen_type_blockindexed.c
> Only in bgp-mpich2/src/mpid: dcmf
> Only in bgp-mpich2/src/mpi/romio/adio: ad_bgl
> Only in bgp-mpich2/src/mpi/romio/adio/common: ad_write_nolock.c
> Only in bgp-mpich2/src/pmi: uni
> Only in bgp-mpich2/test: iotestlist
> Only in bgp-mpich2/test: long.xsl
> Only in bgp-mpich2/test/mpi/cxx/io: iotestlist
> Only in bgp-mpich2/test/mpi/cxx: iotestlist
> Only in bgp-mpich2/test/mpi/f77/io: iotestlist
> Only in bgp-mpich2/test/mpi/f77: iotestlist
> Only in bgp-mpich2/test/mpi/io: iotestlist
> Only in bgp-mpich2/test/mpi: iotestlist
> Only in bgp-mpich2/test: short.xsl
> 
> 
> 
> 
> 
> 
> 
> 
> 
> *Pavan Balaji <balaji at mcs.anl.gov>*
> 
> 02/25/08 01:39 PM
> 
> 	
> To
> 	Joseph Ratterman/Rochester/IBM at IBMUS
> cc
> 	mpich2-core at mcs.anl.gov
> Subject
> 	BGP patch for MPICH2
> 
> 
> 	
> 
> 
> 
> 
> 
> Hi Joe,
> 
> Just pinging to check the status of the BG/P patch for MPICH2. We are
> working on a few bugs and will start our final testing as soon as they
> are fixed. If you think the patch will take much longer, we can add it
> to the trunk after the 1.0.7 release and work on it for 1.0.8.
> Alternatively, if you'd like to contribute some generic parts now and
> more later, that can be worked out as well. Please let us know how you'd
> like to go about with this integration.
> 
> Thanks.
> 
>  -- Pavan
> 
> -- 
> Pavan Balaji
> http://www.mcs.anl.gov/~balaji
> 

-- 
Pavan Balaji
http://www.mcs.anl.gov/~balaji

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