[Llvm-bgq-discuss] mpic++11 Runtime Error on Cetus

[Michael Collins]

Well, it took most of the day, but I finally found a libstdc++.so that
works. The path is as follows:

/bgsys/drivers/V1R2M1/ppc64/toolchain-4.7.2/gnu/build-powerpc64-bgq-linux/gcc-4.7.2-build/powerpc64-bgq-linux/libstdc++-v3/src/.libs/libstdc++.so.6

Now, the program runs exactly as intended. Thanks so much for the help,
Patrick.

On Mon, Jul 18, 2016 at 1:25 PM, Patrick E Gartung <gartung at fnal.gov> wrote:

> Probably this path or something similar
>
>
> /bgsys/drivers/toolchain/V1R2M4_base_4.7.2/gnu-linux-4.7.2/powerpc64-bgq-linux/lib/
>
> From: Michael Collins <mikeliamcollins at gmail.com>
> Date: Monday, July 18, 2016 at 1:11 PM
>
> To: Patrick Gartung <gartung at fnal.gov>
> Cc: "llvm-bgq-discuss at lists.alcf.anl.gov" <
> llvm-bgq-discuss at lists.alcf.anl.gov>
> Subject: Re: [Llvm-bgq-discuss] mpic++11 Runtime Error on Cetus
>
> OK, I'll dig around a bit and see if I can find the libstdc++.so I need.
>
> On Mon, Jul 18, 2016 at 1:02 PM, Patrick E Gartung <gartung at fnal.gov>
> wrote:
>
>> My solution only worked because I compiled with gcc4.8.4 in the mpich_cpp
>> wrapper. I think bgclang is compiled against a different libstdc++.so. This
>> may be the cause of the segfault. You will have to determine the correct
>> LD_LIBRARY_PATH to use with bgclang.
>>
>> From: Michael Collins <mikeliamcollins at gmail.com>
>> Date: Monday, July 18, 2016 at 12:57 PM
>> To: Patrick Gartung <gartung at fnal.gov>
>> Cc: "llvm-bgq-discuss at lists.alcf.anl.gov" <
>> llvm-bgq-discuss at lists.alcf.anl.gov>
>> Subject: Re: [Llvm-bgq-discuss] mpic++11 Runtime Error on Cetus
>>
>> That seems to have done the trick. My program's segfault-ing, but at
>> least that means the library was loaded.
>>
>> On Mon, Jul 18, 2016 at 12:22 PM, Michael Collins <
>> mikeliamcollins at gmail.com> wrote:
>>
>>> Thanks, Patrick. I'll give it a try and report back.
>>>
>>> On Mon, Jul 18, 2016 at 12:20 PM, Patrick E Gartung <gartung at fnal.gov>
>>> wrote:
>>>
>>>> Hi Michael
>>>>
>>>> I had the same problem on vesta. I had to add  the envs option with
>>>> LD_LIBRARY_PATH to the qsub command
>>>>
>>>> qsub -n 2 --mode c1 -t 120 --env
>>>> LD_LIBRARY_PATH=/soft/compilers/gcc/4.8.4/lib/gcc/powerpc64-bgq-linux/4.8.4/:/soft/compilers/gcc/4.8.4/lib/gcc/:/soft/compilers/gcc/4.8.4/lib/gcc/powerpc64-bgq-linux/4.8.4/../../../../powerpc64-bgq-linux/lib/:$LD_LIBRARY_PATH
>>>>
>>>> From: <llvm-bgq-discuss-bounces at lists.alcf.anl.gov> on behalf of
>>>> Michael Collins <mikeliamcollins at gmail.com>
>>>> Date: Monday, July 18, 2016 at 12:14 PM
>>>> To: "llvm-bgq-discuss at lists.alcf.anl.gov" <
>>>> llvm-bgq-discuss at lists.alcf.anl.gov>
>>>> Subject: [Llvm-bgq-discuss] mpic++11 Runtime Error on Cetus
>>>>
>>>> Hello, all.
>>>>
>>>> I'm having some trouble running my Swift/T project on Cetus. I'm
>>>> compiling a shared library with mpic++11 under the mpiwrapper-bclang-mpi3
>>>> wrapper, and my program is dynamically linked to it. At runtime, I'm
>>>> getting the following error when my program tries to load the shared
>>>> library:
>>>>
>>>> stderr[1]: couldn't load file
>>>> "/home/mlcoll/src/eq-c/tests/genmax/EQC/libeqc.so":
>>>> /lib64/bgq/libstdc++.so.6: version `CXXABI_1.3.5' not found (required by
>>>> /soft/compilers/bgclang/r266865-stable/libc++/lib/libc++.so.1)
>>>>
>>>> Any ideas on how to remedy this?
>>>>
>>>> Thanks,
>>>> Mike Collins
>>>>
>>>
>>>
>>
>
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