[Llvm-bgq-discuss] linker errors with llvm/current/bin/bgclang++
Hal Finkel
hfinkel at anl.gov
Thu Jan 24 08:52:42 CST 2013
----- Original Message -----
> From: "Geoffrey Irving" <irving at naml.us>
> To: "Hal Finkel" <hfinkel at anl.gov>
> Cc: llvm-bgq-discuss at lists.alcf.anl.gov
> Sent: Wednesday, January 23, 2013 3:52:07 PM
> Subject: Re: [Llvm-bgq-discuss] linker errors with llvm/current/bin/bgclang++
>
> I'm still seeing this error. If you've already rebased, should I
> file
> a bug upstream?
I've not yet rebased. I hope to get to that today.
> I can minimize it first if that would help.
That will be helpful if filing a bug is necessary.
Thanks again,
Hal
>
> Thanks,
> Geoffrey
>
> On Sat, Jan 19, 2013 at 7:43 PM, Geoffrey Irving <irving at naml.us>
> wrote:
> > Great, thanks. Let me know if you'd like me to minimize it. This
> > time I'll wait a bit to see if I can avoid work.
> >
> > Geoffrey
> >
> > On Sat, Jan 19, 2013 at 7:34 PM, Hal Finkel <hfinkel at anl.gov>
> > wrote:
> >> Geoffrey,
> >>
> >> I've not seen that before. I'll rebase our local version next
> >> week; if it is still a problem after that I'll file a bug report
> >> upstream.
> >>
> >> Thanks again,
> >> Hal
> >>
> >> ----- Original Message -----
> >>> From: "Geoffrey Irving" <irving at naml.us>
> >>> To: "Hal Finkel" <hfinkel at anl.gov>
> >>> Cc: llvm-bgq-discuss at lists.alcf.anl.gov
> >>> Sent: Saturday, January 19, 2013 8:27:43 PM
> >>> Subject: Re: [Llvm-bgq-discuss] linker errors with
> >>> llvm/current/bin/bgclang++
> >>>
> >>> Ah, that would certainly explain it.
> >>>
> >>> Next up, clang is crashing for me with the error shown below.
> >>> The
> >>> full stack trace, precompiled source, and run script are at
> >>>
> >>> http://naml.us/random/clang
> >>>
> >>> Have you seen similar things before, or know any workarounds?
> >>>
> >>> Thanks,
> >>> Geoffrey
> >>>
> >>> vesta:pentago% cns -j 1
> >>> scons: building associated VariantDir targets:
> >>> build/powerpc/release
> >>> /home/projects/llvm/current/bin/bgclang++ -o
> >>> build/powerpc/release/endgame.os -c -U__GXX_EXPERIMENTAL_CXX0X__
> >>> -mcmodel=small -O2 -Wall -Winit-self -Woverloaded-virtual
> >>> -Wsign-compare -fno-strict-aliasing -std=c++11 -Werror
> >>> -Wno-array-bounds -Wno-unknown-pragmas -Wno-invalid-offsetof
> >>> -fPIC
> >>> -DUSE_MPI -DOTHER_PYTHON -DNDEBUG -DOTHER_THREAD_SAFE=1
> >>> -DBOOST_EXCEPTION_DISABLE -DBUILDING_pentago_core
> >>> -I/bgsys/drivers/V1R1M2/ppc64/comm/sys/include
> >>> -I/bgsys/drivers/V1R1M2/ppc64
> >>> -I/bgsys/drivers/V1R1M2/ppc64/spi/include
> >>> -I/bgsys/drivers/V1R1M2/ppc64/spi/include/kernel/cnk
> >>> -I/bgsys/drivers/V1R1M2/ppc64/comm/gcc/include
> >>> -I/usr/include/python2.6
> >>> -I/home/irving/.local/lib/python2.6/site-packages/numpy/core/include
> >>> -I/home/irving/include -I/usr/local/include -Ibuild/include
> >>> -Ibuild/powerpc/release -I. -I/home/irving/download/boost_1_52_0
> >>> endgame.cpp
> >>> clang:
> >>> /gpfs/vesta_home/hfinkel/src/llvm-trunk/tools/clang/lib/Sema/SemaTemplateInstantiate.cpp:2682:
> >>> llvm::PointerUnion<clang::Decl*,
> >>> clang::LocalInstantiationScope::DeclArgumentPack*>*
> >>> clang::LocalInstantiationScope::findInstantiationOf(const
> >>> clang::Decl*): Assertion `isa<LabelDecl>(D) && "declaration not
> >>> instantiated in this scope"' failed.
> >>>
> >>> On Sat, Jan 19, 2013 at 5:52 PM, Hal Finkel <hfinkel at anl.gov>
> >>> wrote:
> >>> > Geoffrey,
> >>> >
> >>> > In general, the code compiled with bgclang will not run on the
> >>> > login nodes. At -O3 (which enables autovectorization), bgclang
> >>> > will generate QPX vector instructions; those QPX instructions
> >>> > are
> >>> > not supported by the Power 7 CPU in the login node. You'll need
> >>> > to
> >>> > submit a job and run on the compute nodes.
> >>> >
> >>> > -Hal
> >>> >
> >>> > ----- Original Message -----
> >>> >> From: "Geoffrey Irving" <geoffrey.irving at gmail.com>
> >>> >> To: "Hal Finkel" <hfinkel at anl.gov>
> >>> >> Cc: "Geoffrey Irving" <irving at naml.us>,
> >>> >> llvm-bgq-discuss at lists.alcf.anl.gov
> >>> >> Sent: Saturday, January 19, 2013 6:17:56 PM
> >>> >> Subject: Re: [Llvm-bgq-discuss] linker errors with
> >>> >> llvm/current/bin/bgclang++
> >>> >>
> >>> >> No, this was on a login node. Am I correct that compiling and
> >>> >> quick
> >>> >> unit tests (which are much faster than compiling) should
> >>> >> happen on
> >>> >> login nodes?
> >>> >>
> >>> >> Geoffrey
> >>> >>
> >>> >> On Jan 19, 2013, at 3:57 PM, Hal Finkel <hfinkel at anl.gov>
> >>> >> wrote:
> >>> >>
> >>> >> > Geoffrey,
> >>> >> >
> >>> >> > You're running on the compute nodes, right? Not the login
> >>> >> > nodes?
> >>> >> >
> >>> >> > -Hal
> >>> >> >
> >>> >> > ----- Original Message -----
> >>> >> >> From: "Geoffrey Irving" <irving at naml.us>
> >>> >> >> To: "Hal Finkel" <hfinkel at anl.gov>
> >>> >> >> Cc: llvm-bgq-discuss at lists.alcf.anl.gov
> >>> >> >> Sent: Friday, January 18, 2013 9:35:18 PM
> >>> >> >> Subject: Re: [Llvm-bgq-discuss] linker errors with
> >>> >> >> llvm/current/bin/bgclang++
> >>> >> >>
> >>> >> >> Cool, that gets me through linking and unit tests in debug
> >>> >> >> mode
> >>> >> >> and
> >>> >> >> optimized with -O2. However, I get an illegal instruction
> >>> >> >> in
> >>> >> >> some
> >>> >> >> static initialization code if I use -O3. I'll see how easy
> >>> >> >> it
> >>> >> >> is
> >>> >> >> to
> >>> >> >> reduce my test case.
> >>> >> >>
> >>> >> >> In any case, progress!
> >>> >> >>
> >>> >> >> Thanks,
> >>> >> >> Geoffrey
> >>> >> >>
> >>> >> >> On Fri, Jan 18, 2013 at 7:18 PM, Hal Finkel
> >>> >> >> <hfinkel at anl.gov>
> >>> >> >> wrote:
> >>> >> >>> Geoffrey,
> >>> >> >>>
> >>> >> >>> I believe this bug has been fixed in trunk; I'll updated
> >>> >> >>> our
> >>> >> >>> install next week. In the mean time, try building with
> >>> >> >>> -mcmodel=small
> >>> >> >>>
> >>> >> >>> -Hal
> >>> >> >>>
> >>> >> >>> ----- Original Message -----
> >>> >> >>>> From: "Geoffrey Irving" <irving at naml.us>
> >>> >> >>>> To: llvm-bgq-discuss at lists.alcf.anl.gov
> >>> >> >>>> Sent: Friday, January 18, 2013 9:10:59 PM
> >>> >> >>>> Subject: [Llvm-bgq-discuss] linker errors with
> >>> >> >>>> llvm/current/bin/bgclang++
> >>> >> >>>>
> >>> >> >>>> I'm trying to get my C++11 app running on vesta.
> >>> >> >>>> Compiling
> >>> >> >>>> with
> >>> >> >>>> clang
> >>> >> >>>> gives me the following linker errors (summarized below,
> >>> >> >>>> with
> >>> >> >>>> full
> >>> >> >>>> build output attached):
> >>> >> >>>>
> >>> >> >>>> /home/projects/llvm/current/bin/bgclang++ -o
> >>> >> >>>> build/powerpc/release/core/array/RawArray.os -c
> >>> >> >>>> -U__GXX_EXPERIMENTAL_CXX0X__ -O3 -funroll-loops -Wall
> >>> >> >>>> -Winit-self
> >>> >> >>>> -Woverloaded-virtual -Wsign-compare -fno-strict-aliasing
> >>> >> >>>> -std=c++0x
> >>> >> >>>> -Werror -Wno-array-bounds -Wno-unknown-pragmas -fPIC
> >>> >> >>>> -DOTHER_PYTHON
> >>> >> >>>> -DNDEBUG -DOTHER_THREAD_SAFE=1 -DBOOST_EXCEPTION_DISABLE
> >>> >> >>>> -DBUILDING_other_core -I/usr/include/python2.6
> >>> >> >>>> -I/home/irving/.local/lib/python2.6/site-packages/numpy/core/include
> >>> >> >>>> -I/usr/local/include -Ibuild/include
> >>> >> >>>> -I/home/irving/download/boost_1_52_0
> >>> >> >>>> core/array/RawArray.cpp
> >>> >> >>>> ...MANY OTHER COMPILE COMMANDS...
> >>> >> >>>> /home/projects/llvm/current/bin/bgclang++ -o
> >>> >> >>>> build/powerpc/release/core/libother_core.so -shared
> >>> >> >>>> -Wl,-rpath=/gpfs/vesta_home/irving/otherlab/other/install/release/lib
> >>> >> >>>> build/powerpc/release/core/array/RawArray.os
> >>> >> >>>> ...MANY_OTHER_OBJECT_FILES... -L/usr/lib64
> >>> >> >>>> -L/usr/local/lib
> >>> >> >>>> -Linstall/release/lib -lpython2.6
> >>> >> >>>> /bgsys/drivers/ppcfloor/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/bin/ld:
> >>> >> >>>> build/powerpc/release/core/array/RawArray.os(.text+0x63e):
> >>> >> >>>> unresolvable R_PPC64_TOC16_HA relocation against symbol
> >>> >> >>>> `_ZTVSt9bad_alloc@@GLIBCXX_3.4'
> >>> >> >>>> /bgsys/drivers/ppcfloor/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/bin/ld:
> >>> >> >>>> build/powerpc/release/core/array/RawArray.os(.text+0x642):
> >>> >> >>>> unresolvable R_PPC64_TOC16_LO relocation against symbol
> >>> >> >>>> `_ZTVSt9bad_alloc@@GLIBCXX_3.4'
> >>> >> >>>> /bgsys/drivers/ppcfloor/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/bin/ld:
> >>> >> >>>> build/powerpc/release/core/array/RawArray.os(.text+0x652):
> >>> >> >>>> unresolvable R_PPC64_TOC16_HA relocation against symbol
> >>> >> >>>> `_ZTISt9bad_alloc@@GLIBCXX_3.4'
> >>> >> >>>> /bgsys/drivers/ppcfloor/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/bin/ld:
> >>> >> >>>> build/powerpc/release/core/array/RawArray.os(.text+0x656):
> >>> >> >>>> unresolvable R_PPC64_TOC16_LO relocation against symbol
> >>> >> >>>> `_ZTISt9bad_alloc@@GLIBCXX_3.4'
> >>> >> >>>> /bgsys/drivers/ppcfloor/gnu-linux/lib/gcc/powerpc64-bgq-linux/4.4.6/../../../../powerpc64-bgq-linux/bin/ld:
> >>> >> >>>> final link failed: Nonrepresentable section on output
> >>> >> >>>> clang: error: linker command failed with exit code 1 (use
> >>> >> >>>> -v
> >>> >> >>>> to
> >>> >> >>>> see
> >>> >> >>>> invocation)
> >>> >> >>>> scons: *** [build/powerpc/release/core/libother_core.so]
> >>> >> >>>> Error 1
> >>> >> >>>>
> >>> >> >>>> Any ideas what might be going wrong? A google search
> >>> >> >>>> turned
> >>> >> >>>> up
> >>> >> >>>> many
> >>> >> >>>> similar bugs in the past, but I haven't found a specific
> >>> >> >>>> reference.
> >>> >> >>>> Notes:
> >>> >> >>>>
> >>> >> >>>> 1. The only library I'm linking to is Python.
> >>> >> >>>> 2. I needed to undef __GXX_EXPERIMENTAL_CXX0X__ in order
> >>> >> >>>> to
> >>> >> >>>> get
> >>> >> >>>> -std=c++0x to compile. Otherwise it complains about
> >>> >> >>>> stuff
> >>> >> >>>> like
> >>> >> >>>> this
> >>> >> >>>> (more details on request):
> >>> >> >>>>
> >>> >> >>>> /bgsys/drivers/ppcfloor/gnu-linux/powerpc64-bgq-linux/include/c++/4.4.6/bits/stl_pair.h:106:10:
> >>> >> >>>> error: no matching function for call to 'move'
> >>> >> >>>> : first(std::move(__p.first)),
> >>> >> >>>> ^~~~~~~~~
> >>> >> >>>>
> >>> >> >>>> Thanks,
> >>> >> >>>> Geoffrey
> >>> >> >>>>
> >>> >> >>>> _______________________________________________
> >>> >> >>>> llvm-bgq-discuss mailing list
> >>> >> >>>> llvm-bgq-discuss at lists.alcf.anl.gov
> >>> >> >>>> https://lists.alcf.anl.gov/mailman/listinfo/llvm-bgq-discuss
> >>> >> >>>>
> >>> >> >>>
> >>> >> >>> --
> >>> >> >>> Hal Finkel
> >>> >> >>> Postdoctoral Appointee
> >>> >> >>> Leadership Computing Facility
> >>> >> >>> Argonne National Laboratory
> >>> >> >>
> >>> >> >
> >>> >> > --
> >>> >> > Hal Finkel
> >>> >> > Postdoctoral Appointee
> >>> >> > Leadership Computing Facility
> >>> >> > Argonne National Laboratory
> >>> >>
> >>> >
> >>> > --
> >>> > Hal Finkel
> >>> > Postdoctoral Appointee
> >>> > Leadership Computing Facility
> >>> > Argonne National Laboratory
> >>>
> >>
> >> --
> >> Hal Finkel
> >> Postdoctoral Appointee
> >> Leadership Computing Facility
> >> Argonne National Laboratory
> >> _______________________________________________
> >> llvm-bgq-discuss mailing list
> >> llvm-bgq-discuss at lists.alcf.anl.gov
> >> https://lists.alcf.anl.gov/mailman/listinfo/llvm-bgq-discuss
>
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